PaPaRa
PArsimony-based Phylogeny-Aware Read alignment program. The tool uses a given multipe sequence alignment and corresponding reference tree to align short reads for analysis with the EPA (Evolutionary Placement Algorithm).
PArsimony-based Phylogeny-Aware Read alignment program. The tool uses a given multipe sequence alignment and corresponding reference tree to align short reads for analysis with the EPA (Evolutionary Placement Algorithm).
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