HITS Publications

2023

• Chai H, Strube M (2023). Investigating multilingual coreference resolution by universal annotations, Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2023, Singapore, 6-10 December 2023, pp.10010-10024 1725
• Fatima M, Kolber T, Markert K, Strube M (2023). SimCSum: Joint learning of simplification and cross-lingual summarization for cross-lingual science journalism, Proceedings of the Forth Workshop on New Frontiers in Summarization. Singapore, 6 December 2023, pp.24-40. 1727
• Abaza H, Shutsko A, Golebiewski M, Klopfenstein S, Schmidt CO, Vorisek C, Brünings-Kuppe C, Clemens V, Darms J, Hanß S, Intemann T, Jannasch F, Kasbohm E, Lindstädt B, Löbe M, Orban E, Perrar I, Peters M, Sax U, Schulze M, Schupp C, Schwarz F, Schwedhelm C, Strathmann S, Waltemath D, Wünsche H, Zeleke A (2023). The NFDI4Health Metadata Schema (V3_3) 1780
• Zaunseder E, Mütze U, Garbade SF, Haupt S, Kölker S, Heuveline V (2023). Deep Learning and Explainable Artificial Intelligence for Improving Specificity and Detecting Metabolic Patterns in Newborn Screening, 2023 IEEE Symposium Series on Computational Intelligence (SSCI),pp.1566-1571,IEEE 1799
• Machmeier S, Hoecker M, Heuveline V (2023). Explainable Artificial Intelligence for Improving a Session-Based Malware Traffic Classification with Deep Learning, 2023 IEEE Symposium Series on Computational Intelligence (SSCI),pp.850-855,IEEE 1805
• Rahman MT, Koski MK, Panecka-Hofman J, Schmitz W, Kastaniotis AJ, Wade RC, Wierenga RK, Hiltunen JK, Autio KJ (2023). An engineered variant of MECR reductase reveals indispensability of long-chain acyl-ACPs for mitochondrial respiration, Nat Commun 14(1),619 1583
• Amaro-Seoane P, Andrews J, Sedda MA, Askar A, Baghi Q, Balasov R, Bartos I, Bavera SS, Bellovary J, Berry CP, Berti E, Bianchi S, Blecha L, Blondin S, Bogdanović T, Boissier S, Bonetti M, Bonoli S, Bortolas E, Breivik K, Capelo PR, Caramete L, Cattorini F, Charisi M, Chaty S, Chen X, Chruślińska M, Chua AJ, Church R, Colpi M, D’Orazio D, Danielski C, Davies MB, Dayal P, Rosa AD, Derdzinski A, Destounis K, Dotti M, Dutan I, Dvorkin I, Fabj G, Foglizzo T, Ford S, Fouvry J, Franchini A, Fragos T, Fryer C, Gaspari M, Gerosa D, Graziani L, Groot P, Habouzit M, Haggard D, Haiman Z, Han W, Istrate A, Johansson PH, Khan FM, Kimpson T, Kokkotas K, Kong A, Korol V, Kremer K, Kupfer T, Lamberts A, Larson S, Lau M, Liu D, Lloyd-Ronning N, Lodato G, Lupi A, Ma C, Maccarone T, Mandel I, Mangiagli A, Mapelli M, Mathis S, Mayer L, McGee S, McKernan B, Miller MC, Mota DF, Mumpower M, Nasim SS, Nelemans G, Noble S, Pacucci F, Panessa F, Paschalidis V, Pfister H, Porquet D, Quenby J, Ricarte A, Röpke FK, Regan J, Rosswog S, Ruiter A, Ruiz M, Runnoe J, Schneider R, Schnittman J, Secunda A, Sesana A, Seto N, Shao L, Shapiro S, Sopuerta C, Stone NC, Suvorov A, Tamanini N, Tamfal T, Tauris T, Temmink K, Tomsick J, Toonen S, Torres-Orjuela A, Toscani M, Tsokaros A, Unal C, Vázquez-Aceves V, Valiante R, Putten Mv, Roestel Jv, Vignali C, Volonteri M, Wu K, Younsi Z, Yu S, Zane S, Zwick L, Antonini F, Baibhav V, Barausse E, Rivera AB, Branchesi M, Branduardi-Raymont G, Burdge K, Chakraborty S, Cuadra J, Dage K, Davis B, Mink SEd, Decarli R, Doneva D, Escoffier S, Gandhi P, Haardt F, Lousto CO, Nissanke S, Nordhaus J, O’Shaughnessy R, Zwart SP, Pound A, Schussler F, Sergijenko O, Spallicci A, Vernieri D, Vigna-Gómez A (2023). Astrophysics with the Laser Interferometer Space Antenna, Living Rev Relativ 26(1),2 1696
• Röpke FK, Marco OD (2023). Simulations of common-envelope evolution in binary stellar systems: physical models and numerical techniques, Living Rev Comput Astrophys 9(1),2 1697
• Mukesh S, Mukherjee G, Singh R, Steenbuck N, Demidova C, Joshi P, Sangamwar AT, Wade RC (2023). Comparative analysis of drug-salt-polymer interactions by experiment and molecular simulation improves biopharmaceutical performance, Commun Chem 6(1),201 1719
• Ernst M, Evans JD, Gryn'ova G (2023). Host–guest interactions in framework materials: Insight from modeling, Chemical Physics Reviews 4(4),041303 1729
• Bodensteiner J, Sana H, Dufton P, Wang C, Langer N, Banyard G, Mahy L, Koter Ad, Mink Sd, Evans C, Götberg Y, Hénault-Brunet V, Patrick L, Schneider F (2023). The young massive SMC cluster NGC 330 seen by MUSE. III. Stellar parameters and rotational velocities, A&A 680:A32 1753
• Møller P, Seppälä TT, Ahadova A, Crosbie EJ, Holinski-Feder E, Scott R, Haupt S, Möslein G, Winship I, Broeke SWB, Kohut KE, Ryan N, Bauerfeind P, Thomas LE, Evans DG, Aretz S, Sijmons RH, Half E, Heinimann K, Horisberger K, Monahan K, Engel C, Cavestro GM, Fruscio R, Abu-Freha N, Zohar L, Laghi L, Bertario L, Bonanni B, Tibiletti MG, Lino-Silva LS, Vaccaro C, Valle AD, Rossi BM, Silva LAd, Nascimento ILdO, Rossi NT, Dębniak T, Mecklin J, Bernstein I, Lindblom A, Sunde L, Nakken S, Heuveline V, Burn J, Hovig E, Kloor M, Sampson JR, Dominguez-Valentin M (2023). Dominantly inherited micro-satellite instable cancer – the four Lynch syndromes – an EHTG, PLSD position statement, Hered Cancer Clin Pract 21(1),19 1802
• Trujillo-Gomez S, Kruijssen JMD, Pfeffer J, Reina-Campos M, Crain RA, Bastian N, Cabrera-Ziri I (2023). In situ or accreted? Using deep learning to infer the origin of extragalactic globular clusters from observables, Monthly Notices of the Royal Astronomical Society 526(4):5735-5755 1888
• Wahl N, Morel B, Stamatakis A (2023). Approximating Phylogenetic Tree Distributions with Distance-Based Methods (Master's Thesis) 1914
• Brockhaus EK, Wolffram D, Stadler T, Osthege M, Mitra T, Littek JM, Krymova E, Klesen AJ, Huisman JS, Heyder S, Helleckes LM, an der Heiden M, Funk S, Abbott S, Bracher J (2023). Why are different estimates of the effective reproductive number so different? A case study on COVID-19 in Germany, PLOS Computational Biology, 19(11):e1011653 1811
• Glaser M, Ritterhof J, Most P, Wade RC (2023). Wird KI neue Medikamente gegen Herzkrankheiten hervorbringen?, Aktuelle Kardiologie 12(06):450-458 1736
• Nießner J (2023). Computational Models of Hen Egg White Lysozyme Physisorption to Silica- and Mica-like Surfaces (Master's Thesis), Physics, Department of Physics and Astronomy, Ruprecht-Karls University, Heidelberg 1759
• Linciano P, Quotadamo A, Luciani R, Santucci M, Zorn KM, Foil DH, Lane TR, Silva ACd, Santarem N, Moraes CB, Freitas-Junior L, Wittig U, Mueller W, Tonelli M, Ferrari S, Venturelli A, Gul S, Kuzikov M, Ellinger B, Reinshagen J, Ekins S, Costi MP (2023). High-Throughput Phenotypic Screening and Machine Learning Methods Enabled the Selection of Broad-Spectrum Low-Toxicity Antitrypanosomatidic Agents., J Med Chem. 2023 Nov 3. doi: 10.1021/acs.jmedchem.3c01322. 1734
• Leidi G, Andrassy R, Higl J, Edelmann PVF, Röpke FK (2023). Turbulent dynamo action and its effects on the mixing at the convective boundary of an idealized oxygen-burning shell, A&A 679:A132 1824
• Covelo-Paz A, Themeßl N, Espinoza-Rojas F, Hekker S (2023). New red giants in NGC 6791 and NGC 6819 using Kepler superstamps, A&A 679:A134 1864
• Athanasiou C (2023). Modeling of mechanistic effects of neurotrophin modulators (Doctoral Thesis), Faculty of Biosciences, Ruprecht-Karls University, Heidelberg 1760
• Zaunseder E, Mütze U, Okun JG, Hoffmann GF, Kölker S, Heuveline V, Thiele I (2023). Personalised metabolic whole-body models for newborns and infants predict growth and biomarkers of inherited metabolic diseases, biorxiv;2023.10.20.563364v1,[Preprint] 1800
• Buhr Sd, Gräter F (2023). Myristoyl’s dual role in allosterically regulating and localizing Abl kinase, eLife 12:e85216. 1556
• Rasheeda Satheesh A, Knippertz P, Fink AH, Walz E, Gneiting T (2023). Sources of predictability of synoptic‐scale rainfall during the West African summer monsoon, Quarterly Journal of the Royal Meteorological Society, 149(757):3721–3737 1720
• Machmeier S, Trageser M, Buchwald M, Heuveline V (2023). A Generalizable Approach for Network Flow Image Representation for Deep Learning, 2023 7th Cyber Security in Networking Conference (CSNet),pp.57-61,IEEE 1804
• Remme R, Kaczun T, Scheurer M, Dreuw A, Hamprecht FA (2023). KineticNet: Deep learning a transferable kinetic energy functional for orbital-free density functional theory, The Journal of Chemical Physics 159(14),144113 1822
• Gryn’ova G (2023). Crafting molecular architectures with guided diffusion, Nat Comput Sci 1717
• Morel B, Williams TA, Stamatakis A, Szöllősi GJ (2023). AleRax: A tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss, biorxiv;2023.10.06.561091v2,[Preprint] 1751
• Herrera-Rodríguez AM, Dasanna AK, Daday C, Cruz-Chú ER, Aponte-Santamaría C, Schwarz US, Gräter F (2023). The role of flow in the self-assembly of dragline spider silk proteins, Biophysical Journal 1715
• Ehlert C, Piras A, Gryn’ova G (2023). CO 2 on Graphene: Benchmarking Computational Approaches to Noncovalent Interactions, ACS Omega 8(39):35768-35778 1716
• Togkousidis A, Kozlov OM, Haag J, Höhler D, Stamatakis A (2023). Adaptive RAxML-NG: Accelerating Phylogenetic Inference under Maximum Likelihood using Dataset Difficulty, Molecular Biology and Evolution 40(10),msad227 1750
• Bracher J, Rüter L, Krüger F, Lerch S, Schienle M (2023). Direction augmentation in the evaluation of armed conflict predictions, International Interactions, 49(6):989–1004 1810
• Zhao W, López F, Riestenberg JM, Strube M, Taha D, Trettel S (2023). Modeling graphs beyond hyperbolic: Graph neural networks in symmetric positive definite matrices, Proceedings of Machine Learning and Knowledge Discovery in Databases: Research Track - European Conference. ECML PKDD, Turin, Italy, 18-22 September 2023, pages 122-139 1724
• Ertini K, Folatelli G, Martinez L, Bersten M, Anderson J, Ashall C, Baron E, Bose S, Brown P, Burns C, DerKacy J, Ferrari L, Galbany L, Hsiao E, Kumar S, Lu J, Mazzali P, Morrell N, Orellana M, Pessi P, Phillips M, Piro A, Polin A, Shahbandeh M, Shappee B, Stritzinger M, Suntzeff N, Tucker M, Elias-Rosa N, Kuncarayakti H, Gutiérrez C, Kozyreva A, Müller-Bravo T, Chen T-, Hinkle J, Payne A, Székely P, Szalai T, Barna B, Könyves-Tóth R, Bánhidi D, Bı́ró I, Csányi I, Kriskovits L, Pál A, Szabó Z, Szakáts R, Vida K, Vinkó J, Gromadzki M, Harvey L, Nicholl M, Paraskeva E, Young D, Englert B (2023). SN 2021gno: a Calcium-rich transient with double-peaked light curves, Monthly Notices of the Royal Astronomical Society,stad2705 1694
• Fluck J, Golebiewski M, Darms J (2023). Data Publication for Personalised Health Data, Proc Conf Res Data Infrastr 1 1796
• Meineke F, Golebiewski M, Hu X, Kirsten T, Löbe M, Klammt S, Sax U, Müller W (2023). NFDI4Health Local Data Hubs for Finding and Accessing Health Data, Proc Conf Res Data Infrastr 1 1797
• Sax U, Henke C, Dräger C, Bender T, Kuntz A, Golebiewski M, Ulrich H, Löbe M (2023). Provenance Core Data Set: A Minimal Information Model for Data Provenance in Biomedical Research, Proc Conf Res Data Infrastr 1 1837
• Roussaki M, Magoulas GE, Fotopoulou T, Santarem N, Barrias E, Pöhner I, Luelmo S, Afroudakis P, Georgikopoulou K, Nevado PT, Eick J, Bifeld E, Corral MJ, Jiménez-Antón MD, Ellinger B, Kuzikov M, Fragiadaki I, Scoulica E, Gul S, Clos J, Prousis KC, Torrado JJ, Alunda JM, Wade RC, Souza Wd, Silva ACd, Calogeropoulou T (2023). Design, synthesis and biological evaluation of antiparasitic dinitroaniline-ether phospholipid hybrids, Bioorganic Chemistry 138:106615 1677
• Collins CE, Sim SA, Shingles LJ, Gronow S, Röpke FK, Pakmor R, Seitenzahl IR, Kromer M (2023). Helium as a signature of the double detonation in Type Ia supernovae, Monthly Notices of the Royal Astronomical Society 524(3):4447-4454 1698
• Ewers I, Rajter L, Czech L, Mahé F, Stamatakis A, Dunthorn M (2023). Interpreting phylogenetic placements for taxonomic assignment of environmental DNA, J Eukaryotic Microbiology 70(5),e12990 1748
• Bernini-Peron M, Marcolino W, Sander A, Bouret J-, Ramachandran V, Saling J, Schneider F, Oskinova L, Najarro F (2023). Clumping and X-rays in cooler B supergiant stars, A&A 677:A50 1941
• Bosse NI, Abbott S, Cori A, van Leeuwen E, Bracher J, Funk S (2023). Scoring epidemiological forecasts on transformed scales, PLOS Computational Biology, 19(8):e1011393 1721
• Tarnow M (2023). Optimization of a Drug: Polymer Formulation Exploiting a Computational Approach based on Molecular Dynamics Simulations (Bachelor's Thesis), Molecular Biotechnology, Faculty of Engineering Sciences, Ruprecht-Karls University, Heidelberg 1762
• Viviani LG, Kokh DB, Wade RC, Amaral AT (2023). Molecular Dynamics Simulations of the Human Ecto-5′-Nucleotidase (h-ecto-5′-NT, CD73): Insights into Protein Flexibility and Binding Site Dynamics, J. Chem. Inf. Model. 63(15):4691-4707 1690
• Abaza H, Shutsko A, Golebiewski M, Klopfenstein S, Schmidt CO, Vorisek C, COVID-19 NTF, NFDI4Health , Brünings-Kuppe C, Clemens V, Darms J, Hanß S, Intemann T, Jannasch F, Kasbohm E, Lindstädt B, Löbe M, Orban E, Perrar I, Peters M, Sax U, Schulze M, Schupp C, Schwarz F, Schwedhelm C, Strathmann S, Waltemath D, Wünsche H, Zeleke A (2023). Metadata schema of the NFDI4Health and the NFDI4Health Task Force COVID-19 (V3_2) 1779
• Wolffram D, Abbott S, an der Heiden M, Funk S, Günther F, Hailer D, Heyder S, Hotz T, van de Kassteele J, Küchenhoff H, Müller-Hansen S, Syliqi D, Ullrich A, Weigert M, Schienle M, Bracher J (2023). Collaborative nowcasting of COVID-19 hospitalization incidences in Germany, PLOS Computational Biology, 19(8):e1011394 1722
• Fedorov R, Gryn’ova G (2023). Unlocking the Potential: Predicting Redox Behavior of Organic Molecules, from Linear Fits to Neural Networks, J. Chem. Theory Comput. 19(15):4796-4814 1685
• Srivastav S, Moore T, Nicholl M, Magee M, Smartt S, Fulton M, Sim S, Pollin J, Galbany L, Inserra C, Kozyreva A, Moriya TJ, Callan F, Sheng X, Smith K, Sommer J, Anderson J, Deckers M, Gromadzki M, Müller-Bravo T, Pignata G, Rest A, Young D (2023). Unprecedented early flux excess in the hybrid 02es-like type Ia supernova 2022ywc indicates interaction with circumstellar material, arXiv e-prints:arXiv:2308.06019 1695
• Noll A, Deheuvels S (2023). Impact of central mixing scheme and nuclear reaction network on the extent of convective cores, A&A 676:A70 1703
• Bloot S, Miguel Y, Bazot M, Howard S (2023). Exoplanet interior retrievals: core masses and metallicities from atmospheric abundances, Monthly Notices of the Royal Astronomical Society 523(4):6282-6292 1708
• Ganna (Anya) Gryn’ova, Helvetica Chimica Acta 106(8),e202300093 1718
• Golebiewski GMM (2023). First Draft of the VHT Roadmap 1821
• Liu Z, Röpke FK, Han Z (2023). Type Ia Supernova Explosions in Binary Systems: A Review, Res. Astron. Astrophys. 23(8):082001 1699
• Franz F, Tapia-Rojo R, Winograd-Katz S, Boujemaa-Paterski R, Li W, Unger T, Albeck S, Aponte-Santamaría C, Garcia-Manyes S, Medalia O, Geiger B, Gräter F (2023). Allosteric activation of vinculin by talin, Nat Commun 14, 4311 1505
• Liu W, Fan Y, Strube M (2023). HITS at DISRPT 2023: Discourse segmentation, connective detection, and relation classification, Proceedings of the 3rd Shared Task on Discourse Relation Parsing and Treebanking (DISRPT 2023), Toronto, Ontario, Canada, 14 July 2023, pages 43–49 1726
• Braud C, Hardmeier C, Li JJ, Loaciga S, Strube M, Zeldes A (2023). Proceedings of the 4th Workshop on Computational Approaches to Discourse, Proceedings of the 4th Workshop on Computational Approaches to Discourse, Toronto, Ontaria, Canada, 13-14July 2023 1733
• Trost J, Haag J, Höhler D, Jacob L, Stamatakis A, Boussau B (2023). Simulations of sequence evolution: how (un)realistic they are and why, biorxiv;2023.07.11.548509v2,[Preprint] 1747
• Fatima M, Strube M (2023). Cross-lingual Science Journalism: Select, Simplify and Rewrite Summaries for Non-expert Readers, Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics, Toronto, Ontario, Canada, July 2023, pp. 1843-1861 1678
• Liu W, Fu X, Strube M (2023). Modeling Structural Similarities between Documents for Coherence Assessment with Graph Convolutional Networks, Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics, Toronto, Ontario, Canada, July 2023, pp. 7792-7808 1679
• Liu W, Strube M (2023). Annotation-Inspired Implicit Discourse Relation Classification with Auxiliary Discourse Connective Generation, Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics, Toronto, Ontario, Canada, July 2023, pp. 15696-15712 1680
• Ray EL, Brooks LC, Bien J, Biggerstaff M, Bosse NI, Bracher J, Cramer EY, Funk S, Gerding A, Johansson MA, Rumack A, Wang Y, Zorn M, Tibshirani RJ, Reich NG (2023). Comparing trained and untrained probabilistic ensemble forecasts of COVID-19 cases and deaths in the United States, International Journal of Forecasting, 39(3):1366–1383 1691
• Vink JS, Mehner A, Crowther PA, Fullerton A, Garcia M, Martins F, Morrell N, Oskinova LM, St-Louis N, ud-Doula A, Sander AAC, Sana H, Bouret J-, Kubátová B, Marchant P, Martins LP, Wofford A, Loon JTv, Telford OG, Götberg Y, Bowman DM, Erba C, Kalari VM, Abdul-Masih M, Alkousa T, Backs F, Barbosa CL, Berlanas SR, Bernini-Peron M, Bestenlehner JM, Blomme R, Bodensteiner J, Brands SA, Evans CJ, David-Uraz A, Driessen FA, Dsilva K, Geen S, Gómez-González VMA, Grassitelli L, Hamann W-, Hawcroft C, Herrero A, Higgins ER, Hillier DJ, Ignace R, Istrate AG, Kaper L, Kee ND, Kehrig C, Keszthelyi Z, Klencki J, Koter Ad, Kuiper R, Laplace E, Larkin CJK, Lefever RR, Leitherer C, Lennon DJ, Mahy L, Apellániz JM, Maravelias G, Marcolino W, McLeod AF, Mink SEd, Najarro F, Oey MS, Parsons TN, Pauli D, Pedersen MG, Prinja RK, Ramachandran V, Ramírez-Tannus MC, Sabhahit GN, Schootemeijer A, Serantes SR, Shenar T, Stringfellow GS, Sudnik N, Tramper F, Wang L (2023). X-Shooting ULLYSES: Massive stars at low metallicity. I. Project description, A&A 675:A154 1769
• Häuser L, Haag J, Stamatakis A (2023). Quantitative Analysis and Characterization of Natural Language Evolution Datasets (Master's Thesis) 1916
• Schneider FR, Podsiadlowski P, Laplace E (2023). Bimodal Black Hole Mass Distribution and Chirp Masses of Binary Black Hole Mergers, ApJL 950(2):L9 1754
• Kirschner M, Golebiewski M, Moser H, consortium E, 5 I2 (2023). ISO/TS 9491-1:2023 Biotechnology — Predictive computational models in personalized medicine research — Part 1: Constructing, verifying and validating models, ISO/TS 9491-1:2023 Biotechnology — Predictive computational models in personalized medicine research — Part 1: Constructing, verifying and validating models. International Organization for Standardization (ISO), Geneva, Switzerland. https://www.iso.org/standard/83516.html 1668
• Llenga S, Gryn’ova G (2023). Matrix of orthogonalized atomic orbital coefficients representation for radicals and ions, The Journal of Chemical Physics 158(21),214116 1682
• Gomez GM, D’Arrigo G, Sanchez CP, Berger F, Wade RC, Lanzer M (2023). PfCRT mutations conferring piperaquine resistance in falciparum malaria shape the kinetics of quinoline drug binding and transport, PLoS Pathog 19(6):e1011436 1683
• Lahén N, Naab T, Kauffmann G, Szécsi D, Hislop JM, Rantala A, Kozyreva A, Walch S, Hu C (2023). Formation of star clusters and enrichment by massive stars in simulations of low-metallicity galaxies with a fully sampled initial stellar mass function, Monthly Notices of the Royal Astronomical Society 522(2):3092-3116 1664
• Kuruwita RL, Haugbølle T (2023). The contribution of binary star formation via core fragmentation on protostellar multiplicity, A&A 674:A196 1765
• Resin J (2023). From classification accuracy to proper scoring rules: Elicitability of probabilistic top list predictions, Journal of Machine Learning Research, 24(173):1–21 1681
• Ernst M, Gryn'ova G (2023). Engineering Host–Guest Interactions in Organic Framework Materials for Drug Delivery, Helvetica Chimica Acta,e202300013 1675
• Schulz B (2023). Statistical postprocessing of numerical weather prediction forecasts using machine learning (Doctoral Thesis), PhD Thesis, Faculty of Mathematics, Karlsruhe Institute of Technology 2031
• Tiwari DD, Hoffmann N, Didi K, Deshpande S, Ghosh S, Nguyen TVN, Raman K, Hermjakob H, Sheriff R (2023). BioModelsML: Building a FAIR and reproducible collection of machine learning models in life sciences and medicine for easy reuse, biorxiv;2023.05.22.540599v1,[Preprint] 1714
• Bettisworth B, Jordan AI, Stamatakis A (2023). Phylourny: Efficiently calculating elimination tournament win probabilities via phylogenetic methods, Statistics and Computing, 33(4):80 2039
• Farmer R, Laplace E, Ma J, Mink SEd, Justham S (2023). Nucleosynthesis of Binary-stripped Stars, ApJ 948(2):111 1767
• Abaza H, Shutsko A, Golebiewski M, Klopfenstein S, Schmidt CO, Vorisek C, COVID-19 NTF, NFDI4Health , Brünings-Kuppe C, Clemens V, Darms J, Hanß S, Intemann T, Jannasch F, Kasbohm E, Lindstadt B, Lobe M, Orban E, Perrar I, Peters M, Sax U, Schulze M, Schupp C, Schwarz F, Schwedhelm C, Strathmann S, Waltemath D, Wünsche H, Zeleke AA (2023). Metadata schema of the NFDI4Health and the NFDI4Health Task Force COVID-19 (V3_1) 1778
• Zhao W, Strube M, Eger S (2023). DiscoScore: Evaluating text generation with BERT and discourse coherence, Proceedings of the 17th Conference of the European Chapter of the Association for Computational Linguistics, Dubrovnik, Croatia, May 2023, pp.3865-3883 1588
• Resin J (2023). A simple algorithm for exact multinomial tests, Journal of Computational and Graphical Statistics, 32(2):539–550 1504
• Muñiz‐Chicharro A, Votapka LW, Amaro RE, Wade RC (2023). Brownian dynamics simulations of biomolecular diffusional association processes, WIREs Comput Mol Sci 13(3),e1649 1555
• Schulze S, Fransson C, Kozyreva A, Chen T, Yaron O, Jerkstrand A, Gal-Yam A, Sollerman J, Yan L, Kangas T, Leloudas G, Omand CM, Smartt SJ, Yang Y, Nicholl M, Sarin N, Yao Y, Brink TG, Sharon A, Rossi A, Chen P, Chen Z, Cikota A, De K, Drake AJ, Filippenko AV, Fremling C, Freour L, Fynbo JPU, Ho AY, Inserra C, Irani I, Kuncarayakti H, Lunnan R, Mazzali P, Ofek EO, Palazzi E, Perley DA, Pursiainen M, Rothberg B, Shingles LJ, Smith K, Taggart K, Tartaglia L, Zheng W, Anderson JP, Cassara L, Christensen E, Djorgovski SG, Galbany L, Gkini A, Graham MJ, Gromadzki M, Groom SL, Hiramatsu D, Howell DA, Kasliwal MM, McCully C, Müller-Bravo TE, Paiano S, Paraskeva E, Pessi PJ, Polishook D, Rau A, Rigault M, Rusholme B (2023). 1100 Days in the Life of the Supernova 2018ibb – the Best Pair-Instability Supernova Candidate, to date, arXiv e-prints:arXiv:2305.05796 1661
• Schulze S, Fransson C, Kozyreva A, Chen T, Yaron O, Jerkstrand A, Gal-Yam A, Sollerman J, Yan L, Kangas T, Leloudas G, Omand CM, Smartt SJ, Yang Y, Nicholl M, Sarin N, Yao Y, Brink TG, Sharon A, Rossi A, Chen P, Chen Z, Cikota A, De K, Drake AJ, Filippenko AV, Fremling C, Freour L, Fynbo JP, Ho AY, Inserra C, Irani I, Kuncarayakti H, Lunnan R, Mazzali P, Ofek EO, Palazzi E, Perley DA, Pursiainen M, Rothberg B, Shingles LJ, Smith K, Taggart K, Tartaglia L, Zheng W, Anderson JP, Cassara L, Christensen E, Djorgovski SG, Galbany L, Gkini A, Graham MJ, Gromadzki M, Groom SL, Hiramatsu D, Howell DA, Kasliwal MM, McCully C, Müller-Bravo TE, Paiano S, Paraskeva E, Pessi PJ, Polishook D, Rau A, Rigault M, Rusholme B (2023). 1100 Days in the Life of the Supernova 2018ibb – the Best Pair-Instability Supernova Candidate, to date, arXiv e-prints:arXiv:2305.05796 1663
• Dimitriadis G, Maguire K, Karambelkar VR, Lebron RJ, Liu C, Kozyreva A, Miller AA, Ridden-Harper R, Anderson JP, Chen T, Coughlin M, Valle MD, Drake A, Galbany L, Gromadzki M, Groom SL, Gutiérrez CP, Ihanec N, Inserra C, Johansson J, Müller-Bravo TE, Nicholl M, Polin A, Rusholme B, Schulze S, Sollerman J, Srivastav S, Taggart K, Wang Q, Yang Y, Young DR (2023). SN 2021zny: an early flux excess combined with late-time oxygen emission suggests a double white dwarf merger event, Monthly Notices of the Royal Astronomical Society 521(1):1162-1183 1665
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